Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CNOT4O95628 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.42■□□□□ 0.06
CNOT4O95628 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 AC009336.1-201ENST00000608941 1553 ntBASIC15.41■□□□□ 0.06
CNOT4O95628 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 MIR1233-2-201ENST00000408138 82 ntBASIC15.41■□□□□ 0.06
CNOT4O95628 MIR1233-1-201ENST00000408722 82 ntBASIC15.41■□□□□ 0.06
CNOT4O95628 LAGE3P1-201ENST00000425356 484 ntBASIC15.41■□□□□ 0.06
CNOT4O95628 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.41■□□□□ 0.06
CNOT4O95628 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 MTDHP4-201ENST00000600287 670 ntBASIC15.41■□□□□ 0.06
CNOT4O95628 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 AL589182.2-201ENST00000619332 1049 ntBASIC15.41■□□□□ 0.06
CNOT4O95628 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CNOT4O95628 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CNOT4O95628 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNOT4O95628 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CNOT4O95628 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CNOT4O95628 AC012313.1-201ENST00000593393 3059 ntBASIC15.4■□□□□ 0.06
CNOT4O95628 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CNOT4O95628 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CNOT4O95628 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CNOT4O95628 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CNOT4O95628 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 AC107918.4-202ENST00000641623 219 ntBASIC15.4■□□□□ 0.06
CNOT4O95628 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CNOT4O95628 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CNOT4O95628 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT4O95628 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT4O95628 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.4■□□□□ 0.06
CNOT4O95628 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 HLA-J-201ENST00000462773 1622 ntBASIC15.39■□□□□ 0.05
CNOT4O95628 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CNOT4O95628 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CNOT4O95628 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 REXO1L11P-201ENST00000620964 1927 ntBASIC15.39■□□□□ 0.05
CNOT4O95628 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CNOT4O95628 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CNOT4O95628 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
CNOT4O95628 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.39■□□□□ 0.05
CNOT4O95628 AC006557.2-201ENST00000592985 1240 ntBASIC15.39■□□□□ 0.05
CNOT4O95628 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 AC025062.2-201ENST00000605477 670 ntBASIC15.39■□□□□ 0.05
CNOT4O95628 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.39■□□□□ 0.05
CNOT4O95628 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CNOT4O95628 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT4O95628 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.39■□□□□ 0.05
CNOT4O95628 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT4O95628 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms