Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN3O95197 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RTN3O95197 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RTN3O95197 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 MIR574-201ENST00000385209 96 ntBASIC18.25■□□□□ 0.51
RTN3O95197 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 ACTG1P4-201ENST00000425123 1122 ntBASIC18.25■□□□□ 0.51
RTN3O95197 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 KRT18P58-201ENST00000527480 1120 ntBASIC18.25■□□□□ 0.51
RTN3O95197 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 Z83851.2-201ENST00000609564 659 ntBASIC18.25■□□□□ 0.51
RTN3O95197 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN3O95197 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN3O95197 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTN3O95197 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN3O95197 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.24■□□□□ 0.51
RTN3O95197 AC104109.2-201ENST00000602919 1418 ntBASIC18.24■□□□□ 0.51
RTN3O95197 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 AC008764.6-201ENST00000595909 2069 ntBASIC18.24■□□□□ 0.51
RTN3O95197 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 PCDHA12-202ENST00000613593 2588 ntBASIC18.24■□□□□ 0.51
RTN3O95197 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 ELK2BP-201ENST00000415014 1224 ntBASIC18.24■□□□□ 0.51
RTN3O95197 LINC00982-205ENST00000420957 435 ntBASIC18.24■□□□□ 0.51
RTN3O95197 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTN3O95197 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTN3O95197 UNC93B6-202ENST00000528242 690 ntBASIC18.24■□□□□ 0.51
RTN3O95197 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN3O95197 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 AC133963.1-201ENST00000504166 1679 ntBASIC18.24■□□□□ 0.51
RTN3O95197 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN3O95197 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN3O95197 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RTN3O95197 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN3O95197 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 AC067852.2-201ENST00000590513 2313 ntBASIC18.23■□□□□ 0.51
RTN3O95197 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN3O95197 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 AC006504.4-201ENST00000592118 1568 ntBASIC18.23■□□□□ 0.51
RTN3O95197 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN3O95197 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RTN3O95197 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.23■□□□□ 0.51
RTN3O95197 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.23■□□□□ 0.51
RTN3O95197 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 AL353135.1-201ENST00000606729 504 ntBASIC18.23■□□□□ 0.51
RTN3O95197 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN3O95197 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN3O95197 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN3O95197 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms