Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG5O95196 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.56■□□□□ 0.56
CSPG5O95196 COX20P2-201ENST00000452636 358 ntBASIC18.56■□□□□ 0.56
CSPG5O95196 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.56■□□□□ 0.56
CSPG5O95196 AC109322.1-201ENST00000524499 1264 ntBASIC18.56■□□□□ 0.56
CSPG5O95196 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG5O95196 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG5O95196 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.56■□□□□ 0.56
CSPG5O95196 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.56■□□□□ 0.56
CSPG5O95196 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CSPG5O95196 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.56■□□□□ 0.56
CSPG5O95196 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.56■□□□□ 0.56
CSPG5O95196 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CSPG5O95196 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG5O95196 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CSPG5O95196 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CSPG5O95196 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.55■□□□□ 0.56
CSPG5O95196 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.55■□□□□ 0.56
CSPG5O95196 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 AC005498.2-205ENST00000593218 784 ntBASIC18.55■□□□□ 0.56
CSPG5O95196 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.55■□□□□ 0.56
CSPG5O95196 AC092902.6-201ENST00000641783 218 ntBASIC18.55■□□□□ 0.56
CSPG5O95196 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG5O95196 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 AL031598.1-201ENST00000561511 1773 ntBASIC18.55■□□□□ 0.56
CSPG5O95196 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG5O95196 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.55■□□□□ 0.56
CSPG5O95196 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG5O95196 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CSPG5O95196 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG5O95196 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG5O95196 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG5O95196 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG5O95196 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG5O95196 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 OR6D1P-202ENST00000641007 5290 ntBASIC18.54■□□□□ 0.56
CSPG5O95196 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 AC006116.8-202ENST00000587620 1550 ntBASIC18.54■□□□□ 0.56
CSPG5O95196 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG5O95196 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG5O95196 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG5O95196 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CSPG5O95196 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CSPG5O95196 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG5O95196 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.53■□□□□ 0.56
CSPG5O95196 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms