Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 FADS2-212ENST00000522639 360 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 FADS2-215ENST00000574708 385 ntTSL 3 BASIC7.61□□□□□ -1.19
USH2AO75445 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 AC010319.3-201ENST00000597028 470 ntBASIC7.61□□□□□ -1.19
USH2AO75445 TEX48-202ENST00000612244 662 ntTSL 3 BASIC7.61□□□□□ -1.19
USH2AO75445 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 AGER-203ENST00000375065 665 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 AC104457.1-201ENST00000401024 814 ntBASIC7.61□□□□□ -1.19
USH2AO75445 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC7.61□□□□□ -1.19
USH2AO75445 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC7.61□□□□□ -1.19
USH2AO75445 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 AC016027.1-202ENST00000607927 1699 ntBASIC7.61□□□□□ -1.19
USH2AO75445 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
USH2AO75445 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
USH2AO75445 FZD10-202ENST00000539839 3282 ntBASIC7.61□□□□□ -1.19
USH2AO75445 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 HINT2P1-201ENST00000419438 481 ntBASIC7.61□□□□□ -1.19
USH2AO75445 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC7.61□□□□□ -1.19
USH2AO75445 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC7.61□□□□□ -1.19
USH2AO75445 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 SATB1-217ENST00000493952 626 ntTSL 3 BASIC7.61□□□□□ -1.19
USH2AO75445 USP32P1-208ENST00000506594 1164 ntBASIC7.61□□□□□ -1.19
USH2AO75445 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC7.61□□□□□ -1.19
USH2AO75445 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC7.61□□□□□ -1.19
USH2AO75445 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC7.61□□□□□ -1.19
USH2AO75445 GOLGA2P4-201ENST00000441462 777 ntBASIC7.61□□□□□ -1.19
USH2AO75445 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 LITAF-210ENST00000571976 548 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 LITAF-214ENST00000574703 486 ntTSL 2 BASIC7.61□□□□□ -1.19
USH2AO75445 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC7.6□□□□□ -1.19
USH2AO75445 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USH2AO75445 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USH2AO75445 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC7.6□□□□□ -1.19
USH2AO75445 POLI-202ENST00000406285 2030 ntTSL 2 BASIC7.6□□□□□ -1.19
USH2AO75445 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
USH2AO75445 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
USH2AO75445 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USH2AO75445 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
USH2AO75445 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC7.6□□□□□ -1.19
USH2AO75445 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC7.6□□□□□ -1.19
USH2AO75445 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC7.6□□□□□ -1.19
USH2AO75445 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC7.6□□□□□ -1.19
USH2AO75445 AC105129.2-201ENST00000559536 390 ntBASIC7.6□□□□□ -1.19
USH2AO75445 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC7.6□□□□□ -1.19
USH2AO75445 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC7.6□□□□□ -1.19
USH2AO75445 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC7.6□□□□□ -1.19
USH2AO75445 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC7.6□□□□□ -1.19
USH2AO75445 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms