Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.51■□□□□ 0.39
KDELR3O43731 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
KDELR3O43731 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.51■□□□□ 0.39
KDELR3O43731 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 RPL13AP23-201ENST00000480739 586 ntBASIC17.51■□□□□ 0.39
KDELR3O43731 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.51■□□□□ 0.39
KDELR3O43731 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.51■□□□□ 0.39
KDELR3O43731 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.51■□□□□ 0.39
KDELR3O43731 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KDELR3O43731 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
KDELR3O43731 GGTLC5P-201ENST00000617623 998 ntBASIC17.51■□□□□ 0.39
KDELR3O43731 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.51■□□□□ 0.39
KDELR3O43731 AF228730.7-201ENST00000641842 219 ntBASIC17.51■□□□□ 0.39
KDELR3O43731 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KDELR3O43731 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.51■□□□□ 0.39
KDELR3O43731 AL645608.8-201ENST00000606034 2086 ntBASIC17.51■□□□□ 0.39
KDELR3O43731 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KDELR3O43731 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KDELR3O43731 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.5■□□□□ 0.39
KDELR3O43731 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.5■□□□□ 0.39
KDELR3O43731 PAWRP1-201ENST00000451083 565 ntBASIC17.5■□□□□ 0.39
KDELR3O43731 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.5■□□□□ 0.39
KDELR3O43731 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.5■□□□□ 0.39
KDELR3O43731 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.5■□□□□ 0.39
KDELR3O43731 AC145285.3-201ENST00000564603 959 ntBASIC17.5■□□□□ 0.39
KDELR3O43731 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.5■□□□□ 0.39
KDELR3O43731 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.5■□□□□ 0.39
KDELR3O43731 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
KDELR3O43731 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.5■□□□□ 0.39
KDELR3O43731 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KDELR3O43731 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
KDELR3O43731 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KDELR3O43731 LINC02012-201ENST00000608206 1725 ntBASIC17.5■□□□□ 0.39
KDELR3O43731 PI4KAP1-204ENST00000612579 1703 ntBASIC17.5■□□□□ 0.39
KDELR3O43731 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.49■□□□□ 0.39
KDELR3O43731 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KDELR3O43731 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KDELR3O43731 LETM1P2-201ENST00000597330 2178 ntBASIC17.49■□□□□ 0.39
KDELR3O43731 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.49■□□□□ 0.39
KDELR3O43731 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.49■□□□□ 0.39
KDELR3O43731 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
KDELR3O43731 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
KDELR3O43731 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 AC009947.1-201ENST00000444350 727 ntBASIC17.49■□□□□ 0.39
KDELR3O43731 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 Z83851.2-201ENST00000609564 659 ntBASIC17.49■□□□□ 0.39
KDELR3O43731 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.49■□□□□ 0.39
KDELR3O43731 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.49■□□□□ 0.39
KDELR3O43731 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.49■□□□□ 0.39
KDELR3O43731 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KDELR3O43731 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms