Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.29■□□□□ 0.36
LDB2O43679 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB2O43679 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 AF238378.1-201ENST00000526806 358 ntBASIC17.29■□□□□ 0.36
LDB2O43679 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.29■□□□□ 0.36
LDB2O43679 AC008608.2-201ENST00000606089 416 ntBASIC17.29■□□□□ 0.36
LDB2O43679 IFNL4P1-201ENST00000607083 540 ntBASIC17.29■□□□□ 0.36
LDB2O43679 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 AD000864.1-201ENST00000624076 2295 ntBASIC17.29■□□□□ 0.36
LDB2O43679 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB2O43679 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB2O43679 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LDB2O43679 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
LDB2O43679 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LDB2O43679 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LDB2O43679 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LDB2O43679 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 LINC00982-205ENST00000420957 435 ntBASIC17.28■□□□□ 0.36
LDB2O43679 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.28■□□□□ 0.36
LDB2O43679 TPM4P1-201ENST00000436100 807 ntBASIC17.28■□□□□ 0.36
LDB2O43679 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.28■□□□□ 0.36
LDB2O43679 SAPCD2P3-201ENST00000455031 850 ntBASIC17.28■□□□□ 0.36
LDB2O43679 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 SART3-203ENST00000546611 1184 ntBASIC17.28■□□□□ 0.36
LDB2O43679 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.28■□□□□ 0.36
LDB2O43679 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.28■□□□□ 0.36
LDB2O43679 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.28■□□□□ 0.36
LDB2O43679 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LDB2O43679 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.28■□□□□ 0.36
LDB2O43679 AL022326.1-202ENST00000641533 845 ntBASIC17.28■□□□□ 0.36
LDB2O43679 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LDB2O43679 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LDB2O43679 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LDB2O43679 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LDB2O43679 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LDB2O43679 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LDB2O43679 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.27■□□□□ 0.36
LDB2O43679 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.27■□□□□ 0.36
LDB2O43679 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LDB2O43679 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LDB2O43679 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
LDB2O43679 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.27■□□□□ 0.36
LDB2O43679 AC124947.2-201ENST00000547118 1133 ntBASIC17.27■□□□□ 0.36
LDB2O43679 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.27■□□□□ 0.36
LDB2O43679 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.27■□□□□ 0.36
LDB2O43679 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.27■□□□□ 0.36
LDB2O43679 AC064862.7-201ENST00000604520 867 ntBASIC17.27■□□□□ 0.36
LDB2O43679 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LDB2O43679 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LDB2O43679 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
LDB2O43679 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LDB2O43679 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.27■□□□□ 0.36
LDB2O43679 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LDB2O43679 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LDB2O43679 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms