Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.83■□□□□ 0.61
TGFB1I1O43294 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TGFB1I1O43294 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
TGFB1I1O43294 AL121761.2-201ENST00000598007 1648 ntBASIC18.83■□□□□ 0.61
TGFB1I1O43294 AD000864.1-201ENST00000624076 2295 ntBASIC18.83■□□□□ 0.61
TGFB1I1O43294 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 AC018712.1-201ENST00000455767 687 ntBASIC18.83■□□□□ 0.6
TGFB1I1O43294 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 AC139887.3-201ENST00000568585 713 ntBASIC18.83■□□□□ 0.6
TGFB1I1O43294 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 AC107918.4-202ENST00000641623 219 ntBASIC18.83■□□□□ 0.6
TGFB1I1O43294 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TGFB1I1O43294 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TGFB1I1O43294 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 RPS2P1-201ENST00000434010 821 ntBASIC18.82■□□□□ 0.6
TGFB1I1O43294 FAM197Y8-203ENST00000450145 560 ntBASIC18.82■□□□□ 0.6
TGFB1I1O43294 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 AC148477.8-201ENST00000624298 468 ntBASIC18.82■□□□□ 0.6
TGFB1I1O43294 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TGFB1I1O43294 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.82■□□□□ 0.6
TGFB1I1O43294 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AC004870.1-201ENST00000315132 882 ntBASIC18.81■□□□□ 0.6
TGFB1I1O43294 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 DUX4L17-201ENST00000557360 1267 ntBASIC18.81■□□□□ 0.6
TGFB1I1O43294 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.81■□□□□ 0.6
TGFB1I1O43294 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TGFB1I1O43294 AC009053.2-201ENST00000563701 2365 ntBASIC18.81■□□□□ 0.6
TGFB1I1O43294 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TGFB1I1O43294 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms