Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 AP000997.3-201ENST00000623333 2250 ntBASIC20.62■□□□□ 0.89
FOXN1O15353 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 AC134043.2-201ENST00000624206 2238 ntBASIC20.62■□□□□ 0.89
FOXN1O15353 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
FOXN1O15353 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN1O15353 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN1O15353 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 GMCL1P1-201ENST00000463439 1581 ntBASIC20.61■□□□□ 0.89
FOXN1O15353 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXN1O15353 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXN1O15353 AL627223.1-201ENST00000416693 442 ntBASIC20.61■□□□□ 0.89
FOXN1O15353 U91328.1-201ENST00000437528 223 ntBASIC20.61■□□□□ 0.89
FOXN1O15353 RPS15P9-201ENST00000494093 319 ntBASIC20.61■□□□□ 0.89
FOXN1O15353 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.61■□□□□ 0.89
FOXN1O15353 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 AC008687.5-201ENST00000593746 558 ntBASIC20.61■□□□□ 0.89
FOXN1O15353 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN1O15353 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN1O15353 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXN1O15353 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
FOXN1O15353 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
FOXN1O15353 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
FOXN1O15353 RHOQP3-201ENST00000437982 621 ntBASIC20.6■□□□□ 0.89
FOXN1O15353 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
FOXN1O15353 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXN1O15353 SLC25A39P2-201ENST00000537614 270 ntBASIC20.6■□□□□ 0.89
FOXN1O15353 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 SPDYE22P-201ENST00000582158 798 ntBASIC20.6■□□□□ 0.89
FOXN1O15353 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXN1O15353 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXN1O15353 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.6■□□□□ 0.89
FOXN1O15353 AL662799.1-202ENST00000614205 422 ntBASIC20.6■□□□□ 0.89
FOXN1O15353 AC010654.1-201ENST00000615722 808 ntBASIC20.6■□□□□ 0.89
FOXN1O15353 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.6■□□□□ 0.89
FOXN1O15353 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXN1O15353 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FOXN1O15353 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN1O15353 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FOXN1O15353 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
FOXN1O15353 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXN1O15353 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
FOXN1O15353 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN1O15353 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN1O15353 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN1O15353 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXN1O15353 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXN1O15353 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN1O15353 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN1O15353 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
FOXN1O15353 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
FOXN1O15353 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
FOXN1O15353 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN1O15353 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN1O15353 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms