Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN5O00501 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN5O00501 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN5O00501 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN5O00501 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLDN5O00501 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN5O00501 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLDN5O00501 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLDN5O00501 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN5O00501 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN5O00501 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN5O00501 AC140113.2-201ENST00000604370 208 ntBASIC18.22■□□□□ 0.51
CLDN5O00501 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
CLDN5O00501 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN5O00501 PI4KAP1-204ENST00000612579 1703 ntBASIC18.22■□□□□ 0.51
CLDN5O00501 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN5O00501 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN5O00501 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN5O00501 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN5O00501 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN5O00501 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 AP002414.1-201ENST00000391405 1147 ntBASIC18.21■□□□□ 0.51
CLDN5O00501 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.21■□□□□ 0.51
CLDN5O00501 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN5O00501 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN5O00501 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLDN5O00501 AC139713.2-201ENST00000641328 2723 ntBASIC18.21■□□□□ 0.5
CLDN5O00501 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN5O00501 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN5O00501 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN5O00501 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLDN5O00501 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN5O00501 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
CLDN5O00501 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 PMS2P1-201ENST00000431037 1228 ntBASIC18.2■□□□□ 0.5
CLDN5O00501 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN5O00501 KRT18P58-201ENST00000527480 1120 ntBASIC18.2■□□□□ 0.5
CLDN5O00501 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN5O00501 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN5O00501 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 AC016396.2-201ENST00000562575 1417 ntBASIC18.2■□□□□ 0.5
CLDN5O00501 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 AC093525.9-201ENST00000624961 1746 ntBASIC18.2■□□□□ 0.5
CLDN5O00501 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN5O00501 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms