Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 RPL37AP1-201ENST00000412502 279 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 SNX29P1-201ENST00000548357 1007 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 AL031055.1-201ENST00000606362 631 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 AL589739.1-201ENST00000607720 493 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 MIR6869-201ENST00000619434 62 ntBASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM88BA6NKF7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 RNU1-129P-201ENST00000384064 167 ntBASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 BNIP3P42-201ENST00000454982 569 ntBASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 DOC2GP-202ENST00000514950 1163 ntBASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 U1.21-201ENST00000580816 167 ntBASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 BNIP3P29-201ENST00000598302 571 ntBASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 AC011447.5-201ENST00000616168 564 ntBASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM88BA6NKF7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 ELK2AP-201ENST00000392510 1007 ntBASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 AC105233.2-201ENST00000523697 349 ntBASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 AF228730.5-201ENST00000530288 346 ntBASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.85■□□□□ 0.77
TMEM88BA6NKF7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM88BA6NKF7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms