Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC092068.3-201ENST00000587894 2016 ntBASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MEIS3P1A6NDR6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CCR12P-201ENST00000446203 998 ntBASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 AC113410.3-201ENST00000623366 203 ntBASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 AC063926.3-201ENST00000624734 5658 ntBASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 AC092364.2-201ENST00000596710 2692 ntBASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MEIS3P1A6NDR6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 AC007663.1-201ENST00000438948 1240 ntBASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MEIS3P1A6NDR6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 BX276092.7-203ENST00000637198 1536 ntBASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MEIS3P1A6NDR6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms