Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC024909.3-201ENST00000611513 2257 ntBASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AC096633.1-201ENST00000422446 749 ntBASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AL157888.1-201ENST00000631930 593 ntBASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRDV1A0A1B0GX56 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 ABHD17AP1-201ENST00000358206 933 ntBASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 AC009947.2-201ENST00000444014 672 ntBASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 AL359736.2-201ENST00000621992 437 ntBASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRDV1A0A1B0GX56 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 TSPY12P-201ENST00000421279 868 ntBASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRDV1A0A1B0GX56 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms