Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 LINC00982-205ENST00000420957 435 ntBASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 FAAHP1-202ENST00000446499 1238 ntBASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 EMBP1-201ENST00000458200 901 ntBASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC196A0A1B0GTZ2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 AP001094.4-201ENST00000579008 2176 ntBASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 AC004870.1-201ENST00000315132 882 ntBASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 RN7SL510P-201ENST00000581311 263 ntBASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 MTDHP4-201ENST00000600287 670 ntBASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC196A0A1B0GTZ2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL121912.1-201ENST00000603683 238 ntBASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC196A0A1B0GTZ2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 AC139887.3-201ENST00000568585 713 ntBASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC196A0A1B0GTZ2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC196A0A1B0GTZ2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms