Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB2Q9Y5E7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB2Q9Y5E7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB2Q9Y5E7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 AC008667.4-201ENST00000607370 168 ntBASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB2Q9Y5E7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 LINC00982-205ENST00000420957 435 ntBASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 AC108073.2-201ENST00000464002 357 ntBASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 IGHV3-65-201ENST00000523210 341 ntBASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB2Q9Y5E7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 KRT18P2-201ENST00000447938 1258 ntBASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 AL353135.1-201ENST00000606729 504 ntBASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 AL138688.1-201ENST00000624851 1594 ntBASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHB2Q9Y5E7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB2Q9Y5E7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms