Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
R3HCC1Q9Y3T6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 AC112907.2-201ENST00000448639 330 ntBASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 AL157888.1-201ENST00000631930 593 ntBASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 AC026691.1-201ENST00000602502 2017 ntBASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
R3HCC1Q9Y3T6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 AL163051.1-201ENST00000569214 1512 ntBASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.89■□□□□ 0.77
R3HCC1Q9Y3T6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms