Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCNL1Q9UK58 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 ATP5G2P4-201ENST00000442175 420 ntBASIC21.8■■□□□ 1.08
CCNL1Q9UK58 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 KRT17P7-201ENST00000451704 1104 ntBASIC21.8■■□□□ 1.08
CCNL1Q9UK58 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.8■■□□□ 1.08
CCNL1Q9UK58 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 AC022144.1-201ENST00000602255 1580 ntBASIC21.79■■□□□ 1.08
CCNL1Q9UK58 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 WIZP1-201ENST00000531444 2299 ntBASIC21.79■■□□□ 1.08
CCNL1Q9UK58 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNL1Q9UK58 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 ARSEP1-201ENST00000420443 635 ntBASIC21.78■■□□□ 1.08
CCNL1Q9UK58 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 SPTLC1P1-201ENST00000447199 261 ntBASIC21.78■■□□□ 1.08
CCNL1Q9UK58 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNL1Q9UK58 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms