Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 KLF4P1-201ENST00000412782 1185 ntBASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 LAGE3P1-201ENST00000425356 484 ntBASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 AC098831.1-202ENST00000438821 336 ntBASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 STK25P1-201ENST00000585406 838 ntBASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 OR6D1P-202ENST00000641007 5290 ntBASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CLIP2Q9UDT6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 AC003669.1-201ENST00000334569 611 ntBASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 AC108860.2-201ENST00000562760 2183 ntBASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIP2Q9UDT6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 STK19B-204ENST00000512515 211 ntBASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIP2Q9UDT6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 AC104109.2-201ENST00000602919 1418 ntBASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLIP2Q9UDT6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIP2Q9UDT6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIP2Q9UDT6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.51■□□□□ 0.87
CLIP2Q9UDT6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLIP2Q9UDT6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIP2Q9UDT6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms