Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 MIR4751-201ENST00000578027 74 ntBASIC16.3■□□□□ 0.2
CTSFQ9UBX1 AC008667.4-201ENST00000607370 168 ntBASIC16.3■□□□□ 0.2
CTSFQ9UBX1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 AC133963.1-201ENST00000504166 1679 ntBASIC16.3■□□□□ 0.2
CTSFQ9UBX1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 ACTG1P4-201ENST00000425123 1122 ntBASIC16.29■□□□□ 0.2
CTSFQ9UBX1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 RNA5SP416-201ENST00000516838 111 ntBASIC16.29■□□□□ 0.2
CTSFQ9UBX1 IGHV3-65-201ENST00000523210 341 ntBASIC16.29■□□□□ 0.2
CTSFQ9UBX1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 AC092865.5-201ENST00000545435 363 ntBASIC16.29■□□□□ 0.2
CTSFQ9UBX1 AC064836.3-201ENST00000607928 673 ntBASIC16.29■□□□□ 0.2
CTSFQ9UBX1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTSFQ9UBX1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 KRT18P13-201ENST00000400056 1290 ntBASIC16.28■□□□□ 0.2
CTSFQ9UBX1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 BX842568.4-201ENST00000421222 227 ntBASIC16.28■□□□□ 0.2
CTSFQ9UBX1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.28■□□□□ 0.2
CTSFQ9UBX1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CTSFQ9UBX1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms