Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 AL691432.3-201ENST00000621860 400 ntBASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 AL355877.3-201ENST00000622820 899 ntBASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 AC073592.5-201ENST00000624854 528 ntBASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPARGC1AQ9UBK2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 AC132938.5-201ENST00000624980 1813 ntBASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 AC003669.1-201ENST00000334569 611 ntBASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 OR6D1P-203ENST00000641209 4860 ntBASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPARGC1AQ9UBK2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 RN7SL510P-201ENST00000581311 263 ntBASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AL139327.4-201ENST00000612362 153 ntBASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AC073592.4-201ENST00000623827 446 ntBASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 SIGLEC16-201ENST00000599858 1437 ntBASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PPARGC1AQ9UBK2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 CROCCP1-201ENST00000426910 5675 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms