Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR6799-201ENST00000620297 69 ntBASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CXXC1Q9P0U4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 MIR346-201ENST00000362234 95 ntBASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 U91328.1-201ENST00000437528 223 ntBASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 AL606495.2-201ENST00000605867 535 ntBASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 AC004233.3-201ENST00000607794 1269 ntBASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CXXC1Q9P0U4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 AC012569.1-201ENST00000591191 1524 ntBASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 AC109635.5-201ENST00000533593 962 ntBASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 AC027307.2-201ENST00000591252 911 ntBASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 AC008267.7-201ENST00000624570 1194 ntBASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 WASH6P-202ENST00000359512 1437 ntBASIC18.4■□□□□ 0.54
CXXC1Q9P0U4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CXXC1Q9P0U4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.39■□□□□ 0.54
CXXC1Q9P0U4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.39■□□□□ 0.54
CXXC1Q9P0U4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 SPTLC1P1-201ENST00000447199 261 ntBASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 AC005412.3-201ENST00000580309 715 ntBASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 AC073592.8-201ENST00000624126 511 ntBASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXXC1Q9P0U4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 AC022144.1-201ENST00000602255 1580 ntBASIC18.38■□□□□ 0.53
CXXC1Q9P0U4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms