Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 AC124067.4-201ENST00000519691 2379 ntBASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 RN7SL850P-201ENST00000579959 291 ntBASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 AL121672.3-201ENST00000608644 468 ntBASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 AC009336.1-201ENST00000608941 1553 ntBASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NSMCE4AQ9NXX6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
NSMCE4AQ9NXX6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 BX276092.5-203ENST00000456199 560 ntBASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 AL121956.5-201ENST00000625261 221 ntBASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.33■□□□□ 0.36
NSMCE4AQ9NXX6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AL118508.1-201ENST00000613502 2345 ntBASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AC005915.1-201ENST00000624912 2018 ntBASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 RCN1P1-201ENST00000400413 996 ntBASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 TMPOP1-202ENST00000424642 1267 ntBASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AC011467.2-201ENST00000598425 242 ntBASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NSMCE4AQ9NXX6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms