Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 AC046185.3-201ENST00000623228 1824 ntBASIC16.83■□□□□ 0.28
NDE1Q9NXR1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 CRYGFP-201ENST00000418459 633 ntBASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AL353719.1-201ENST00000566847 864 ntBASIC16.82■□□□□ 0.28
NDE1Q9NXR1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 AL139327.4-201ENST00000612362 153 ntBASIC16.82■□□□□ 0.28
NDE1Q9NXR1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDE1Q9NXR1 PAUPAR-201ENST00000630360 2965 ntBASIC16.82■□□□□ 0.28
NDE1Q9NXR1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 KRT8P47-201ENST00000604727 1398 ntBASIC16.81■□□□□ 0.28
NDE1Q9NXR1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 ESRRAP1-201ENST00000400596 1257 ntBASIC16.81■□□□□ 0.28
NDE1Q9NXR1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 CD177P1-201ENST00000606252 935 ntBASIC16.81■□□□□ 0.28
NDE1Q9NXR1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDE1Q9NXR1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 AC023824.1-201ENST00000562945 2975 ntBASIC16.8■□□□□ 0.28
NDE1Q9NXR1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 AC092171.3-201ENST00000610122 2651 ntBASIC16.8■□□□□ 0.28
NDE1Q9NXR1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.8■□□□□ 0.28
NDE1Q9NXR1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms