Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 LINC01126-201ENST00000623515 1646 ntBASIC16.85■□□□□ 0.29
THSD1Q9NS62 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AC254562.1-201ENST00000417586 456 ntBASIC16.85■□□□□ 0.29
THSD1Q9NS62 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AC007967.3-201ENST00000434308 558 ntBASIC16.85■□□□□ 0.29
THSD1Q9NS62 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AC073592.4-201ENST00000623827 446 ntBASIC16.85■□□□□ 0.29
THSD1Q9NS62 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.85■□□□□ 0.29
THSD1Q9NS62 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THSD1Q9NS62 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 AC108860.2-201ENST00000562760 2183 ntBASIC16.84■□□□□ 0.29
THSD1Q9NS62 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 PRYP5-201ENST00000451909 266 ntBASIC16.84■□□□□ 0.29
THSD1Q9NS62 CYMP-203ENST00000474680 1263 ntBASIC16.84■□□□□ 0.29
THSD1Q9NS62 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 YBX1P5-201ENST00000509441 847 ntBASIC16.84■□□□□ 0.29
THSD1Q9NS62 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 PMPCAP1-201ENST00000508114 1576 ntBASIC16.84■□□□□ 0.29
THSD1Q9NS62 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
THSD1Q9NS62 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
THSD1Q9NS62 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
THSD1Q9NS62 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.83■□□□□ 0.28
THSD1Q9NS62 PP12613-201ENST00000424958 2230 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms