Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF4G1-227ENST00000455679 542 ntTSL 416.67■□□□□ 0.263e-9■■□□□ 13.7
XRN2Q9H0D6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.094e-7■■□□□ 13.7
XRN2Q9H0D6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.54e-7■■□□□ 13.7
XRN2Q9H0D6 SYMPK-202ENST00000593504 5107 ntTSL 215.47■□□□□ 0.077e-7■■□□□ 13.7
XRN2Q9H0D6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.16■□□□□ 0.027e-7■■□□□ 13.7
XRN2Q9H0D6 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.357e-7■■□□□ 13.7
XRN2Q9H0D6 IGF2BP3-213ENST00000491719 800 ntTSL 525.46■■□□□ 1.673e-7■■□□□ 13.7
XRN2Q9H0D6 IGF2BP3-210ENST00000476938 500 ntTSL 219.11■□□□□ 0.653e-7■■□□□ 13.7
XRN2Q9H0D6 IGF2BP3-206ENST00000468005 2948 ntTSL 513.82□□□□□ -0.23e-7■■□□□ 13.7
XRN2Q9H0D6 IGF2BP3-202ENST00000421467 2988 ntTSL 510.44□□□□□ -0.743e-7■■□□□ 13.7
XRN2Q9H0D6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.343e-7■■□□□ 13.7
XRN2Q9H0D6 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.72■□□□□ 0.112e-8■■□□□ 13.7
XRN2Q9H0D6 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.192e-8■■□□□ 13.7
XRN2Q9H0D6 DGKD-204ENST00000430834 5379 ntTSL 1 (best)15.94■□□□□ 0.142e-6■■□□□ 13.7
XRN2Q9H0D6 RNF126-207ENST00000605891 1671 ntTSL 535.59■■■■□ 3.295e-11■■□□□ 13.7
XRN2Q9H0D6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.885e-11■■□□□ 13.7
XRN2Q9H0D6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.21■■■□□ 2.595e-11■■□□□ 13.7
XRN2Q9H0D6 RNF126-203ENST00000589762 963 ntTSL 230.68■■■□□ 2.55e-11■■□□□ 13.7
XRN2Q9H0D6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.41■■■□□ 2.465e-11■■□□□ 13.7
XRN2Q9H0D6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.175e-11■■□□□ 13.7
XRN2Q9H0D6 SLC35D2-204ENST00000482643 754 ntTSL 528.2■■■□□ 2.15e-11■■□□□ 13.7
XRN2Q9H0D6 C2orf82-207ENST00000476690 490 ntTSL 328.05■■■□□ 2.083e-21■■□□□ 13.7
XRN2Q9H0D6 DENND5B-206ENST00000545147 566 ntTSL 227.52■■■□□ 23e-6■■□□□ 13.7
XRN2Q9H0D6 RNF126-205ENST00000591394 733 ntTSL 226.6■■□□□ 1.855e-11■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-211ENST00000496873 499 ntTSL 326.27■■□□□ 1.85e-11■■□□□ 13.7
XRN2Q9H0D6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.06■■□□□ 1.765e-11■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-203ENST00000438545 1025 ntTSL 526.02■■□□□ 1.765e-11■■□□□ 13.7
XRN2Q9H0D6 DENND5B-205ENST00000544698 643 ntTSL 325.84■■□□□ 1.733e-6■■□□□ 13.7
XRN2Q9H0D6 C2orf82-205ENST00000449331 466 ntTSL 325.64■■□□□ 1.73e-21■■□□□ 13.7
XRN2Q9H0D6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.653e-21■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.615e-11■■□□□ 13.7
XRN2Q9H0D6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.52■■□□□ 1.523e-21■■□□□ 13.7
XRN2Q9H0D6 AP006621.3-201ENST00000526588 291 ntTSL 223.48■■□□□ 1.355e-11■■□□□ 13.7
XRN2Q9H0D6 HES1-202ENST00000476918 1009 ntTSL 223.05■■□□□ 1.285e-11■■□□□ 13.7
XRN2Q9H0D6 RNF126-206ENST00000592626 652 ntTSL 222.78■■□□□ 1.245e-11■■□□□ 13.7
XRN2Q9H0D6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.54■■□□□ 1.25e-11■■□□□ 13.7
XRN2Q9H0D6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.973e-21■■□□□ 13.7
XRN2Q9H0D6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.06■□□□□ 0.965e-11■■□□□ 13.7
XRN2Q9H0D6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.71■□□□□ 0.273e-6■■□□□ 13.7
XRN2Q9H0D6 AP1G2-209ENST00000554069 755 ntTSL 316.57■□□□□ 0.245e-11■■□□□ 13.7
XRN2Q9H0D6 AP1G2-233ENST00000557482 728 ntTSL 516.57■□□□□ 0.245e-11■■□□□ 13.7
XRN2Q9H0D6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.228e-6■■□□□ 13.7
XRN2Q9H0D6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.175e-11■■□□□ 13.7
XRN2Q9H0D6 GNAS-236ENST00000479025 466 ntTSL 215.95■□□□□ 0.145e-11■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-206ENST00000465710 460 ntTSL 315.74■□□□□ 0.115e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-213ENST00000485570 498 ntTSL 515.53■□□□□ 0.085e-11■■□□□ 13.7
XRN2Q9H0D6 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 215.46■□□□□ 0.073e-6■■□□□ 13.7
XRN2Q9H0D6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.055e-11■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.8□□□□□ -0.045e-11■■□□□ 13.7
XRN2Q9H0D6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.045e-11■■□□□ 13.7
XRN2Q9H0D6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.075e-11■■□□□ 13.7
XRN2Q9H0D6 RALGDS-213ENST00000493438 4602 ntTSL 214.6□□□□□ -0.075e-11■■□□□ 13.7
XRN2Q9H0D6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.093e-6■■□□□ 13.7
XRN2Q9H0D6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.15e-11■■□□□ 13.7
XRN2Q9H0D6 AP1G2-213ENST00000554816 297 ntTSL 413.93□□□□□ -0.185e-11■■□□□ 13.7
XRN2Q9H0D6 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.263e-6■■□□□ 13.7
XRN2Q9H0D6 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.288e-6■■□□□ 13.7
XRN2Q9H0D6 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.315e-11■■□□□ 13.7
XRN2Q9H0D6 AP1G2-205ENST00000535852 2471 ntTSL 1 (best)12.99□□□□□ -0.335e-11■■□□□ 13.7
XRN2Q9H0D6 GNAS-253ENST00000493958 534 ntTSL 212.88□□□□□ -0.355e-11■■□□□ 13.7
XRN2Q9H0D6 AP1G2-220ENST00000555896 927 ntTSL 1 (best)12.5□□□□□ -0.415e-11■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-204ENST00000439909 562 ntTSL 511.12□□□□□ -0.635e-11■■□□□ 13.7
XRN2Q9H0D6 DCUN1D2-202ENST00000375403 3164 ntTSL 211□□□□□ -0.655e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-201ENST00000277895 2657 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.675e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-204ENST00000369256 3203 ntTSL 5 BASIC10.41□□□□□ -0.745e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-203ENST00000369253 2255 ntTSL 5 BASIC10.19□□□□□ -0.785e-11■■□□□ 13.7
XRN2Q9H0D6 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.95e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC9.17□□□□□ -0.945e-11■■□□□ 13.7
XRN2Q9H0D6 C3orf62-203ENST00000436325 581 ntAPPRIS ALT2 TSL 48.85□□□□□ -0.995e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.06□□□□□ -1.125e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.34□□□□□ -1.235e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.04□□□□□ -1.285e-11■■□□□ 13.7
XRN2Q9H0D6 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.79□□□□□ -1.325e-11■■□□□ 13.7
XRN2Q9H0D6 BRD4-209ENST00000601071 430 ntTSL 55.57□□□□□ -1.525e-11■■□□□ 13.7
XRN2Q9H0D6 EDEM1-205ENST00000465187 585 ntTSL 426.19■■□□□ 1.786e-11■■□□□ 13.7
XRN2Q9H0D6 EDEM1-206ENST00000465369 1956 ntTSL 524.37■■□□□ 1.496e-11■■□□□ 13.7
XRN2Q9H0D6 EDEM1-203ENST00000443790 730 ntTSL 224.21■■□□□ 1.476e-11■■□□□ 13.7
XRN2Q9H0D6 SF3B2-209ENST00000530322 1163 ntTSL 519.77■□□□□ 0.766e-11■■□□□ 13.7
XRN2Q9H0D6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.426e-11■■□□□ 13.7
XRN2Q9H0D6 SF3B2-214ENST00000533595 1081 ntTSL 516.74■□□□□ 0.276e-11■■□□□ 13.7
XRN2Q9H0D6 EDEM1-202ENST00000434243 978 ntTSL 216.01■□□□□ 0.156e-11■■□□□ 13.7
XRN2Q9H0D6 SF3B2-208ENST00000529994 1004 ntTSL 214.12□□□□□ -0.156e-11■■□□□ 13.7
XRN2Q9H0D6 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.796e-11■■□□□ 13.7
XRN2Q9H0D6 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC9.41□□□□□ -0.96e-11■■□□□ 13.7
XRN2Q9H0D6 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.13e-6■■□□□ 13.7
XRN2Q9H0D6 XPO7-206ENST00000519769 590 ntTSL 34.84□□□□□ -1.633e-6■■□□□ 13.7
XRN2Q9H0D6 XPO7-208ENST00000521303 569 ntTSL 53.75□□□□□ -1.813e-6■■□□□ 13.7
XRN2Q9H0D6 ANK1-207ENST00000518061 892 ntTSL 317.84■□□□□ 0.454e-6■■□□□ 13.7
XRN2Q9H0D6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.064e-6■■□□□ 13.7
XRN2Q9H0D6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.154e-6■■□□□ 13.7
XRN2Q9H0D6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.194e-6■■□□□ 13.7
XRN2Q9H0D6 ANK1-209ENST00000520299 3587 ntTSL 29.4□□□□□ -0.94e-6■■□□□ 13.7
XRN2Q9H0D6 ANK1-214ENST00000524227 3825 ntTSL 1 (best)9.32□□□□□ -0.924e-6■■□□□ 13.7
XRN2Q9H0D6 GPR75-ASB3-203ENST00000498475 736 ntTSL 527.82■■■□□ 2.048e-7■■□□□ 13.7
XRN2Q9H0D6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.818e-7■■□□□ 13.7
XRN2Q9H0D6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.561e-6■■□□□ 13.7
XRN2Q9H0D6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.97■□□□□ 0.795e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.515e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.17■□□□□ 0.345e-6■■□□□ 13.6
XRN2Q9H0D6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.37■□□□□ 0.215e-6■■□□□ 13.6
Retrieved 100 of 21,068 protein–RNA pairs in 151.1 ms