Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 AKR1C7P-201ENST00000305623 895 ntBASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 FGFR3P6-201ENST00000457012 610 ntBASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCSER1Q9C0I3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSER1Q9C0I3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 AC008608.2-201ENST00000606089 416 ntBASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 AL353135.1-201ENST00000606729 504 ntBASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 AC012313.10-201ENST00000623509 926 ntBASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSER1Q9C0I3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.33■□□□□ 0.69
CCSER1Q9C0I3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 AL450487.1-201ENST00000426799 995 ntBASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSER1Q9C0I3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms