Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC093503.3-201ENST00000624917 2352 ntBASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP4Q9C0A0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 AC241585.1-201ENST00000433527 519 ntBASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 AC091167.2-201ENST00000579581 588 ntBASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 SPDYE22P-201ENST00000582158 798 ntBASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CNTNAP4Q9C0A0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.58■■□□□ 1.04
CNTNAP4Q9C0A0 SLC22A20-204ENST00000530038 1673 ntBASIC21.58■■□□□ 1.04
CNTNAP4Q9C0A0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP4Q9C0A0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP4Q9C0A0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 AC090164.3-201ENST00000610780 2143 ntBASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP4Q9C0A0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 BX323043.1-201ENST00000641006 1765 ntBASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP4Q9C0A0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 TSSK5P-201ENST00000423978 907 ntBASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 MEIS3P1-201ENST00000495167 958 ntBASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 CR383656.12-201ENST00000549567 513 ntBASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 MIR4453-201ENST00000584019 89 ntBASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms