Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 AC022517.1-201ENST00000592429 346 ntBASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 AC092053.1-201ENST00000605787 1936 ntBASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 AC009065.1-201ENST00000564055 1225 ntBASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM3Q9BZL3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 AL356309.3-201ENST00000624132 1934 ntBASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM3Q9BZL3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 TSPY6P-201ENST00000448518 926 ntBASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 RARRES2P10-201ENST00000564312 460 ntBASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 AC130371.2-201ENST00000619443 611 ntBASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM3Q9BZL3 HOXB1-202ENST00000577092 1414 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms