Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.1□□□□□ -0.47
UPK3BQ9BT76 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 RPS2P28-201ENST00000314255 741 ntBASIC12.1□□□□□ -0.47
UPK3BQ9BT76 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 KRT18P55-202ENST00000578578 1546 ntBASIC12.1□□□□□ -0.47
UPK3BQ9BT76 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 PMPCAP1-201ENST00000508114 1576 ntBASIC12.09□□□□□ -0.47
UPK3BQ9BT76 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 AC018712.1-201ENST00000455767 687 ntBASIC12.09□□□□□ -0.47
UPK3BQ9BT76 AC093909.1-201ENST00000504731 1122 ntBASIC12.09□□□□□ -0.47
UPK3BQ9BT76 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 AP001005.1-201ENST00000571755 1248 ntBASIC12.09□□□□□ -0.47
UPK3BQ9BT76 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 AC073592.4-201ENST00000623827 446 ntBASIC12.09□□□□□ -0.47
UPK3BQ9BT76 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 SIGLEC16-201ENST00000599858 1437 ntBASIC12.09□□□□□ -0.47
UPK3BQ9BT76 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms