Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.11■□□□□ 0.49
SMOQ99835 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMOQ99835 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SMOQ99835 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 MIR940-201ENST00000401276 94 ntBASIC18.11■□□□□ 0.49
SMOQ99835 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 AC007967.2-201ENST00000432613 625 ntBASIC18.11■□□□□ 0.49
SMOQ99835 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.11■□□□□ 0.49
SMOQ99835 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 OR7E47P-204ENST00000575924 449 ntBASIC18.11■□□□□ 0.49
SMOQ99835 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SMOQ99835 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 AC027601.4-201ENST00000611259 610 ntBASIC18.11■□□□□ 0.49
SMOQ99835 GGTLC5P-201ENST00000617623 998 ntBASIC18.11■□□□□ 0.49
SMOQ99835 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 EGFEM1P-202ENST00000431685 1563 ntBASIC18.11■□□□□ 0.49
SMOQ99835 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SMOQ99835 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SMOQ99835 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.11■□□□□ 0.49
SMOQ99835 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.11■□□□□ 0.49
SMOQ99835 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMOQ99835 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.1■□□□□ 0.49
SMOQ99835 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 AC139713.2-201ENST00000641328 2723 ntBASIC18.1■□□□□ 0.49
SMOQ99835 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.1■□□□□ 0.49
SMOQ99835 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.1■□□□□ 0.49
SMOQ99835 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMOQ99835 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMOQ99835 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.1■□□□□ 0.49
SMOQ99835 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.1■□□□□ 0.49
SMOQ99835 MIR4751-201ENST00000578027 74 ntBASIC18.1■□□□□ 0.49
SMOQ99835 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.1■□□□□ 0.49
SMOQ99835 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMOQ99835 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.1■□□□□ 0.49
SMOQ99835 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.09■□□□□ 0.49
SMOQ99835 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 MRPL20P1-201ENST00000400819 433 ntBASIC18.09■□□□□ 0.49
SMOQ99835 MED15P5-201ENST00000423150 992 ntBASIC18.09■□□□□ 0.49
SMOQ99835 PRSS29P-201ENST00000440800 595 ntBASIC18.09■□□□□ 0.49
SMOQ99835 VN2R19P-201ENST00000442399 1052 ntBASIC18.09■□□□□ 0.49
SMOQ99835 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.09■□□□□ 0.49
SMOQ99835 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 FAM197Y3-203ENST00000618346 717 ntBASIC18.09■□□□□ 0.49
SMOQ99835 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.09■□□□□ 0.49
SMOQ99835 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SMOQ99835 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMOQ99835 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.08■□□□□ 0.49
SMOQ99835 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMOQ99835 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMOQ99835 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMOQ99835 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms