Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 AP002414.1-201ENST00000391405 1147 ntBASIC16.79■□□□□ 0.28
SLC38A3Q99624 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 AC023274.1-201ENST00000418278 595 ntBASIC16.79■□□□□ 0.28
SLC38A3Q99624 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 ACTG1P4-201ENST00000425123 1122 ntBASIC16.79■□□□□ 0.28
SLC38A3Q99624 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 VN2R19P-201ENST00000442399 1052 ntBASIC16.79■□□□□ 0.28
SLC38A3Q99624 DNAJB3-201ENST00000446806 729 ntBASIC16.79■□□□□ 0.28
SLC38A3Q99624 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 GGTLC5P-201ENST00000617623 998 ntBASIC16.79■□□□□ 0.28
SLC38A3Q99624 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 MRPL20P1-201ENST00000400819 433 ntBASIC16.78■□□□□ 0.28
SLC38A3Q99624 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.78■□□□□ 0.28
SLC38A3Q99624 PRSS29P-201ENST00000440800 595 ntBASIC16.78■□□□□ 0.28
SLC38A3Q99624 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 AC010327.4-202ENST00000591484 748 ntBASIC16.78■□□□□ 0.28
SLC38A3Q99624 AL139327.4-201ENST00000612362 153 ntBASIC16.78■□□□□ 0.28
SLC38A3Q99624 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A3Q99624 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A3Q99624 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC38A3Q99624 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
SLC38A3Q99624 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC38A3Q99624 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A3Q99624 YBX2P1-201ENST00000394192 760 ntBASIC16.77■□□□□ 0.28
SLC38A3Q99624 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC38A3Q99624 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC38A3Q99624 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms