Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
S1PR3Q99500 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
S1PR3Q99500 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.33□□□□□ -0.11
S1PR3Q99500 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
S1PR3Q99500 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
S1PR3Q99500 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 AC103564.2-201ENST00000432853 1299 ntBASIC14.33□□□□□ -0.12
S1PR3Q99500 TSSC2-201ENST00000450217 709 ntBASIC14.33□□□□□ -0.12
S1PR3Q99500 AC111152.3-201ENST00000569699 673 ntBASIC14.33□□□□□ -0.12
S1PR3Q99500 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.33□□□□□ -0.12
S1PR3Q99500 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.33□□□□□ -0.12
S1PR3Q99500 AC069148.1-201ENST00000608741 768 ntBASIC14.33□□□□□ -0.12
S1PR3Q99500 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.33□□□□□ -0.12
S1PR3Q99500 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.33□□□□□ -0.12
S1PR3Q99500 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
S1PR3Q99500 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.33□□□□□ -0.12
S1PR3Q99500 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.33□□□□□ -0.12
S1PR3Q99500 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
S1PR3Q99500 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
S1PR3Q99500 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.33□□□□□ -0.12
S1PR3Q99500 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
S1PR3Q99500 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
S1PR3Q99500 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC010460.3-201ENST00000511359 1579 ntBASIC14.32□□□□□ -0.12
S1PR3Q99500 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC246785.2-201ENST00000432512 513 ntBASIC14.32□□□□□ -0.12
S1PR3Q99500 AC007967.3-201ENST00000434308 558 ntBASIC14.32□□□□□ -0.12
S1PR3Q99500 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC125634.1-201ENST00000438758 1403 ntBASIC14.32□□□□□ -0.12
S1PR3Q99500 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
S1PR3Q99500 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.32□□□□□ -0.12
S1PR3Q99500 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
S1PR3Q99500 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
S1PR3Q99500 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.31□□□□□ -0.12
S1PR3Q99500 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
S1PR3Q99500 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
S1PR3Q99500 FAM220CP-201ENST00000395253 831 ntBASIC14.31□□□□□ -0.12
S1PR3Q99500 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
S1PR3Q99500 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.31□□□□□ -0.12
S1PR3Q99500 AC122714.2-201ENST00000502787 707 ntBASIC14.31□□□□□ -0.12
S1PR3Q99500 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
S1PR3Q99500 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms