Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 SPDYE14P-201ENST00000442619 822 ntBASIC17.65■□□□□ 0.42
NOTCH4Q99466 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH4Q99466 RNU1-129P-201ENST00000384064 167 ntBASIC17.65■□□□□ 0.42
NOTCH4Q99466 UGT1A2P-201ENST00000454886 866 ntBASIC17.65■□□□□ 0.42
NOTCH4Q99466 RN7SL589P-201ENST00000481268 310 ntBASIC17.65■□□□□ 0.42
NOTCH4Q99466 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 U1.21-201ENST00000580816 167 ntBASIC17.65■□□□□ 0.42
NOTCH4Q99466 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.65■□□□□ 0.42
NOTCH4Q99466 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NOTCH4Q99466 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NOTCH4Q99466 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NOTCH4Q99466 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 AC012569.1-201ENST00000591191 1524 ntBASIC17.64■□□□□ 0.41
NOTCH4Q99466 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.64■□□□□ 0.41
NOTCH4Q99466 AC005237.2-201ENST00000434368 219 ntBASIC17.64■□□□□ 0.41
NOTCH4Q99466 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 AL512356.2-201ENST00000546955 174 ntBASIC17.64■□□□□ 0.41
NOTCH4Q99466 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 AL031055.1-201ENST00000606362 631 ntBASIC17.64■□□□□ 0.41
NOTCH4Q99466 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NOTCH4Q99466 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH4Q99466 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 AC135050.7-201ENST00000624508 2218 ntBASIC17.63■□□□□ 0.41
NOTCH4Q99466 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 AL161645.1-201ENST00000622716 1255 ntBASIC17.63■□□□□ 0.41
NOTCH4Q99466 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 AL353732.1-201ENST00000569618 1459 ntBASIC17.63■□□□□ 0.41
NOTCH4Q99466 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH4Q99466 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.63■□□□□ 0.41
NOTCH4Q99466 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NOTCH4Q99466 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms