Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 MIR3180-1-201ENST00000580374 94 ntBASIC12.68□□□□□ -0.38
MUC4Q99102 MIR3180-3-201ENST00000584616 94 ntBASIC12.68□□□□□ -0.38
MUC4Q99102 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
MUC4Q99102 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
MUC4Q99102 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.68□□□□□ -0.38
MUC4Q99102 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 IER3-202ENST00000376377 1350 ntBASIC12.68□□□□□ -0.38
MUC4Q99102 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MUC4Q99102 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
MUC4Q99102 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 AP003733.1-201ENST00000491725 852 ntBASIC12.67□□□□□ -0.38
MUC4Q99102 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.67□□□□□ -0.38
MUC4Q99102 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.67□□□□□ -0.38
MUC4Q99102 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.67□□□□□ -0.38
MUC4Q99102 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 RNF216P1-203ENST00000404404 2427 ntBASIC12.67□□□□□ -0.38
MUC4Q99102 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
MUC4Q99102 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
MUC4Q99102 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.67□□□□□ -0.38
MUC4Q99102 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MUC4Q99102 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MUC4Q99102 CHCHD2P8-201ENST00000429873 447 ntBASIC12.67□□□□□ -0.38
MUC4Q99102 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.67□□□□□ -0.38
MUC4Q99102 AL121672.3-201ENST00000608644 468 ntBASIC12.67□□□□□ -0.38
MUC4Q99102 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.67□□□□□ -0.38
MUC4Q99102 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MUC4Q99102 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MUC4Q99102 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.66□□□□□ -0.38
MUC4Q99102 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 AC004870.1-201ENST00000315132 882 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MUC4Q99102 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.66□□□□□ -0.38
MUC4Q99102 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
MUC4Q99102 AC109462.3-201ENST00000573934 613 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.66□□□□□ -0.38
MUC4Q99102 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MUC4Q99102 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.66□□□□□ -0.38
MUC4Q99102 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
MUC4Q99102 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 AC092171.3-201ENST00000610122 2651 ntBASIC12.66□□□□□ -0.38
MUC4Q99102 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MUC4Q99102 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms