Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 TFAMP1-201ENST00000412727 736 ntBASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 DUX4L17-201ENST00000557360 1267 ntBASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 AC011467.4-201ENST00000594891 528 ntBASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 AL096865.1-201ENST00000606796 927 ntBASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC3BQ96PB8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 AL592309.1-201ENST00000443127 649 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 SPDYE11-202ENST00000450699 704 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 FAM86C2P-203ENST00000528684 1004 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 DUX4L27-201ENST00000554796 1261 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 SPDYE9P-201ENST00000570642 692 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 SPDYE10P-202ENST00000612005 668 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 SPDYE8P-202ENST00000612377 668 ntBASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC3BQ96PB8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 AC133963.1-201ENST00000504166 1679 ntBASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 AC005237.2-201ENST00000434368 219 ntBASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 AC069335.1-201ENST00000489972 472 ntBASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 Z92544.3-201ENST00000624747 417 ntBASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC3BQ96PB8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms