Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 AC125634.1-201ENST00000438758 1403 ntBASIC16.4■□□□□ 0.22
COL21A1Q96P44 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL21A1Q96P44 AC097374.2-201ENST00000618617 1306 ntBASIC16.4■□□□□ 0.22
COL21A1Q96P44 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL21A1Q96P44 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
COL21A1Q96P44 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
COL21A1Q96P44 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 AC096633.1-201ENST00000422446 749 ntBASIC16.39■□□□□ 0.21
COL21A1Q96P44 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 AL138831.2-201ENST00000606564 490 ntBASIC16.39■□□□□ 0.21
COL21A1Q96P44 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 NSUN5P1-202ENST00000421140 1535 ntBASIC16.39■□□□□ 0.21
COL21A1Q96P44 NSUN5P2-203ENST00000457352 1529 ntBASIC16.39■□□□□ 0.21
COL21A1Q96P44 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 LYSMD4-203ENST00000378904 2122 ntBASIC16.39■□□□□ 0.21
COL21A1Q96P44 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL21A1Q96P44 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COL21A1Q96P44 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 IGHV3-47-201ENST00000425060 335 ntBASIC16.38■□□□□ 0.21
COL21A1Q96P44 AC005104.2-201ENST00000427818 678 ntBASIC16.38■□□□□ 0.21
COL21A1Q96P44 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms