Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF48Q96MX3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC067852.2-201ENST00000590513 2313 ntBASIC14.1□□□□□ -0.15
ZNF48Q96MX3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 NCF1C-201ENST00000438382 1427 ntBASIC14.1□□□□□ -0.15
ZNF48Q96MX3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC003669.1-201ENST00000334569 611 ntBASIC14.1□□□□□ -0.15
ZNF48Q96MX3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 AC009949.1-201ENST00000623048 1830 ntBASIC14.1□□□□□ -0.15
ZNF48Q96MX3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF48Q96MX3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 SIGLEC30P-201ENST00000455569 941 ntBASIC14.09□□□□□ -0.15
ZNF48Q96MX3 AC108073.2-201ENST00000464002 357 ntBASIC14.09□□□□□ -0.15
ZNF48Q96MX3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 MIR4751-201ENST00000578027 74 ntBASIC14.09□□□□□ -0.15
ZNF48Q96MX3 MTDHP5-201ENST00000598980 586 ntBASIC14.09□□□□□ -0.15
ZNF48Q96MX3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 LINC00896-202ENST00000609602 2128 ntBASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms