Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCD1Q96GM5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 OR6D1P-202ENST00000641007 5290 ntBASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 TERC-201ENST00000602385 541 ntBASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 AL671883.3-201ENST00000603274 991 ntBASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 PI4KAP1-204ENST00000612579 1703 ntBASIC18.18■□□□□ 0.5
SMARCD1Q96GM5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCD1Q96GM5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 AC116353.5-201ENST00000638148 1699 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 MED15P5-201ENST00000423150 992 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 AL591424.1-201ENST00000442569 1213 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 MIR4751-201ENST00000578027 74 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 AC027601.4-201ENST00000611259 610 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 CROCCP2-202ENST00000412962 2773 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 EGFEM1P-202ENST00000431685 1563 ntBASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCD1Q96GM5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCD1Q96GM5 AC093525.9-201ENST00000624961 1746 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms