Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 REXO1L6P-202ENST00000619970 1078 ntBASIC17.9■□□□□ 0.46
IFT43Q96FT9 LINC01451-201ENST00000623792 534 ntBASIC17.9■□□□□ 0.46
IFT43Q96FT9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 AC008894.3-201ENST00000624324 3103 ntBASIC17.9■□□□□ 0.46
IFT43Q96FT9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 CICP6-201ENST00000457191 2729 ntBASIC17.9■□□□□ 0.46
IFT43Q96FT9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.89■□□□□ 0.46
IFT43Q96FT9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
IFT43Q96FT9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
IFT43Q96FT9 AL118508.1-201ENST00000613502 2345 ntBASIC17.89■□□□□ 0.46
IFT43Q96FT9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
IFT43Q96FT9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AC010460.3-201ENST00000511359 1579 ntBASIC17.89■□□□□ 0.45
IFT43Q96FT9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AC007967.3-201ENST00000434308 558 ntBASIC17.89■□□□□ 0.45
IFT43Q96FT9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AC091607.1-201ENST00000490318 1060 ntBASIC17.89■□□□□ 0.45
IFT43Q96FT9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AC009533.2-201ENST00000543664 586 ntBASIC17.89■□□□□ 0.45
IFT43Q96FT9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AC133963.1-201ENST00000504166 1679 ntBASIC17.89■□□□□ 0.45
IFT43Q96FT9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 AL513477.1-201ENST00000602865 2407 ntBASIC17.89■□□□□ 0.45
IFT43Q96FT9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.89■□□□□ 0.45
IFT43Q96FT9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IFT43Q96FT9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 COX5BP2-201ENST00000392354 334 ntBASIC17.88■□□□□ 0.45
IFT43Q96FT9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 AC064862.7-201ENST00000604520 867 ntBASIC17.88■□□□□ 0.45
IFT43Q96FT9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 AC108860.2-201ENST00000562760 2183 ntBASIC17.88■□□□□ 0.45
IFT43Q96FT9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 CROCCP1-201ENST00000426910 5675 ntBASIC17.88■□□□□ 0.45
IFT43Q96FT9 REXO1L11P-201ENST00000620964 1927 ntBASIC17.88■□□□□ 0.45
IFT43Q96FT9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
IFT43Q96FT9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IFT43Q96FT9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 HLA-J-201ENST00000462773 1622 ntBASIC17.87■□□□□ 0.45
IFT43Q96FT9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms