Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIPA1Q96FS4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 ABALON-201ENST00000629058 1903 ntBASIC17.33■□□□□ 0.37
SIPA1Q96FS4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIPA1Q96FS4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 FAM58CP-201ENST00000435741 640 ntBASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AL031432.2-201ENST00000566714 459 ntBASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AL928711.1-201ENST00000570165 459 ntBASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AL139327.4-201ENST00000612362 153 ntBASIC17.33■□□□□ 0.36
SIPA1Q96FS4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 LINC01451-201ENST00000623792 534 ntBASIC17.33■□□□□ 0.36
SIPA1Q96FS4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIPA1Q96FS4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ACTG1P14-201ENST00000446382 1122 ntBASIC17.32■□□□□ 0.36
SIPA1Q96FS4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
SIPA1Q96FS4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 AC106820.2-201ENST00000563775 3264 ntBASIC17.31■□□□□ 0.36
SIPA1Q96FS4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms