Protein–RNA interactions for Protein: Q92989

CLP1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1Q92989 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.32■□□□□ 0.52
CLP1Q92989 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.32■□□□□ 0.52
CLP1Q92989 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.32■□□□□ 0.52
CLP1Q92989 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.32■□□□□ 0.52
CLP1Q92989 AC015922.1-201ENST00000421102 1152 ntBASIC18.32■□□□□ 0.52
CLP1Q92989 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.32■□□□□ 0.52
CLP1Q92989 KLF2P3-201ENST00000451977 1087 ntBASIC18.32■□□□□ 0.52
CLP1Q92989 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.32■□□□□ 0.52
CLP1Q92989 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLP1Q92989 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.32■□□□□ 0.52
CLP1Q92989 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 FLJ13224-201ENST00000313737 1514 ntBASIC18.32■□□□□ 0.52
CLP1Q92989 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CLP1Q92989 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.32■□□□□ 0.52
CLP1Q92989 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.32■□□□□ 0.52
CLP1Q92989 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLP1Q92989 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.31■□□□□ 0.52
CLP1Q92989 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.31■□□□□ 0.52
CLP1Q92989 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.31■□□□□ 0.52
CLP1Q92989 AC087641.1-201ENST00000557561 1021 ntBASIC18.31■□□□□ 0.52
CLP1Q92989 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.31■□□□□ 0.52
CLP1Q92989 AL139327.4-201ENST00000612362 153 ntBASIC18.31■□□□□ 0.52
CLP1Q92989 AL161645.1-201ENST00000622716 1255 ntBASIC18.31■□□□□ 0.52
CLP1Q92989 AC084121.4-201ENST00000641598 221 ntBASIC18.31■□□□□ 0.52
CLP1Q92989 AF228730.8-201ENST00000642140 221 ntBASIC18.31■□□□□ 0.52
CLP1Q92989 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.31■□□□□ 0.52
CLP1Q92989 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
CLP1Q92989 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLP1Q92989 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 AL138781.2-201ENST00000617896 1843 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLP1Q92989 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.3■□□□□ 0.52
CLP1Q92989 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 MIR943-201ENST00000401286 94 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 SPCS2P4-201ENST00000436160 681 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 AC002472.2-201ENST00000442739 958 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLP1Q92989 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 DUX4L17-201ENST00000557360 1267 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 LINC01225-203ENST00000563550 1244 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.3■□□□□ 0.52
CLP1Q92989 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.3■□□□□ 0.52
CLP1Q92989 RN7SL204P-201ENST00000582831 262 ntBASIC18.3■□□□□ 0.52
CLP1Q92989 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.3■□□□□ 0.52
CLP1Q92989 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CLP1Q92989 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.3■□□□□ 0.52
CLP1Q92989 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.3■□□□□ 0.52
CLP1Q92989 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLP1Q92989 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CLP1Q92989 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLP1Q92989 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.29■□□□□ 0.52
CLP1Q92989 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLP1Q92989 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLP1Q92989 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.29■□□□□ 0.52
CLP1Q92989 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLP1Q92989 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
CLP1Q92989 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLP1Q92989 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLP1Q92989 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms