Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.81■□□□□ 0.44
SCG3Q8WXD2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCG3Q8WXD2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 CROCCP1-201ENST00000426910 5675 ntBASIC17.8■□□□□ 0.44
SCG3Q8WXD2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 AC133963.1-201ENST00000504166 1679 ntBASIC17.8■□□□□ 0.44
SCG3Q8WXD2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SCG3Q8WXD2 AL162727.3-201ENST00000635661 2787 ntBASIC17.79■□□□□ 0.44
SCG3Q8WXD2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 POM121L3P-201ENST00000419331 1163 ntBASIC17.79■□□□□ 0.44
SCG3Q8WXD2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 AC100803.2-201ENST00000562459 1963 ntBASIC17.79■□□□□ 0.44
SCG3Q8WXD2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCG3Q8WXD2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 FDX1P1-201ENST00000449115 551 ntBASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AC112698.1-201ENST00000510299 916 ntBASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AL353801.3-201ENST00000609898 542 ntBASIC17.78■□□□□ 0.44
SCG3Q8WXD2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms