Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 AC073508.3-201ENST00000619697 1419 ntBASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 AC006449.5-201ENST00000610658 2098 ntBASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 TERF1P1-201ENST00000311003 1181 ntBASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 AC112907.2-201ENST00000448639 330 ntBASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 HOMER2P1-201ENST00000455653 964 ntBASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 STK25P1-201ENST00000585406 838 ntBASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC44A1Q8WWI5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 TSPY5P-201ENST00000426936 936 ntBASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 AL137013.1-201ENST00000432946 1228 ntBASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 AC111152.3-201ENST00000569699 673 ntBASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 AL353801.3-201ENST00000609898 542 ntBASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 KRT8P10-201ENST00000450021 1447 ntBASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC44A1Q8WWI5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 AC103564.2-201ENST00000432853 1299 ntBASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 SPDYE13P-201ENST00000445314 798 ntBASIC17.35■□□□□ 0.37
SLC44A1Q8WWI5 KRT18P21-201ENST00000515767 1272 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms