Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC027307.3-201ENST00000594262 1100 ntBASIC29.55■■■□□ 2.32
TRIM41Q8WV44 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
TRIM41Q8WV44 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM41Q8WV44 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM41Q8WV44 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM41Q8WV44 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM41Q8WV44 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM41Q8WV44 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 RPS2P32-201ENST00000439199 892 ntBASIC29.54■■■□□ 2.32
TRIM41Q8WV44 FAM207CP-201ENST00000443486 507 ntBASIC29.54■■■□□ 2.32
TRIM41Q8WV44 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 AL589182.2-201ENST00000619332 1049 ntBASIC29.54■■■□□ 2.32
TRIM41Q8WV44 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM41Q8WV44 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 LINC00304-203ENST00000565008 1864 ntBASIC29.53■■■□□ 2.32
TRIM41Q8WV44 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 AC004461.1-201ENST00000412461 403 ntBASIC29.53■■■□□ 2.32
TRIM41Q8WV44 GOLGA6L11P-201ENST00000417252 1298 ntBASIC29.53■■■□□ 2.32
TRIM41Q8WV44 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 SLBP-205ENST00000488267 987 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 SRP9-204ENST00000619790 377 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
TRIM41Q8WV44 AC020763.4-201ENST00000623414 4170 ntBASIC29.53■■■□□ 2.32
TRIM41Q8WV44 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 KRT18P27-201ENST00000427733 1299 ntBASIC29.52■■■□□ 2.32
TRIM41Q8WV44 AC055876.3-201ENST00000431496 288 ntBASIC29.52■■■□□ 2.32
TRIM41Q8WV44 GPR53P-205ENST00000457298 1084 ntBASIC29.52■■■□□ 2.32
TRIM41Q8WV44 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 HILS1-202ENST00000545329 423 ntBASIC29.52■■■□□ 2.32
TRIM41Q8WV44 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 AC138649.4-201ENST00000612222 287 ntBASIC29.52■■■□□ 2.32
TRIM41Q8WV44 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 AMT-250ENST00000637682 1823 ntTSL 5 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC29.52■■■□□ 2.32
TRIM41Q8WV44 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
TRIM41Q8WV44 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
TRIM41Q8WV44 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 AL513210.1-201ENST00000629608 234 ntBASIC29.51■■■□□ 2.31
TRIM41Q8WV44 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
TRIM41Q8WV44 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC29.5■■■□□ 2.31
TRIM41Q8WV44 AL133338.1-201ENST00000565695 1517 ntBASIC29.5■■■□□ 2.31
TRIM41Q8WV44 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC29.5■■■□□ 2.31
TRIM41Q8WV44 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC29.5■■■□□ 2.31
TRIM41Q8WV44 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM41Q8WV44 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM41Q8WV44 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC29.5■■■□□ 2.31
TRIM41Q8WV44 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms