Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 HLA-H-201ENST00000383620 1096 ntBASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC25.27■■□□□ 1.64
ARHGEF40Q8TER5 REXO1L11P-201ENST00000620964 1927 ntBASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 REXO1L6P-201ENST00000603433 1515 ntBASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 SLC7A15P-201ENST00000424028 1363 ntBASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 RPL37AP1-201ENST00000412502 279 ntBASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 AC135586.1-201ENST00000539323 574 ntBASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 LINC00895-201ENST00000629028 1637 ntBASIC25.26■■□□□ 1.63
ARHGEF40Q8TER5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 BTBD7P1-201ENST00000447253 1453 ntBASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF40Q8TER5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 PARP8-218ENST00000513738 596 ntTSL 4 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 AC055876.2-201ENST00000531834 546 ntBASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 AC092552.1-201ENST00000547243 906 ntBASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 AL139327.4-201ENST00000612362 153 ntBASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF40Q8TER5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 ANKRD19P-201ENST00000338192 862 ntBASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 AC234783.1-201ENST00000441761 496 ntBASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 AC011495.1-201ENST00000498085 584 ntBASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 AL512343.1-201ENST00000605837 169 ntBASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 COX11-210ENST00000639671 696 ntBASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 AC116562.4-201ENST00000641316 2276 ntBASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF40Q8TER5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 AL353705.2-201ENST00000428243 662 ntBASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 GNAQP1-201ENST00000444815 1067 ntBASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 CHCHD2P3-201ENST00000603038 451 ntBASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC25.22■■□□□ 1.63
ARHGEF40Q8TER5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms