Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL035633.1-201ENST00000406139 838 ntBASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 MCCD1P2-201ENST00000423228 335 ntBASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 YBX1P5-201ENST00000509441 847 ntBASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 AIRN-201ENST00000601203 4374 ntBASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-3Q8TAU0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AC116353.5-201ENST00000638148 1699 ntBASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-3Q8TAU0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 MIR770-201ENST00000390219 98 ntBASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 AC092053.1-201ENST00000605787 1936 ntBASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 AL590787.1-201ENST00000568856 1315 ntBASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.42■□□□□ 0.86
NKX2-3Q8TAU0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-3Q8TAU0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms