Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NKILA-202ENST00000614771 2598 ntBASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 ABCD1P5-201ENST00000445663 754 ntBASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 AC104692.2-201ENST00000603054 253 ntBASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 AC132938.5-201ENST00000624980 1813 ntBASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCC2Q8TAQ2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCC2Q8TAQ2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 RBM17P3-201ENST00000417687 1192 ntBASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 AC106795.1-205ENST00000512851 1056 ntBASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 MTDHP3-201ENST00000594186 672 ntBASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 AC092053.1-201ENST00000605787 1936 ntBASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCC2Q8TAQ2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMARCC2Q8TAQ2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.27■□□□□ 0.83
SMARCC2Q8TAQ2 AP005117.1-201ENST00000584346 1413 ntBASIC20.27■□□□□ 0.83
SMARCC2Q8TAQ2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 AC009336.1-201ENST00000608941 1553 ntBASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 AC011676.5-201ENST00000624864 2660 ntBASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 AL355877.3-201ENST00000622820 899 ntBASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SMARCC2Q8TAQ2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms