Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 AC069335.1-201ENST00000489972 472 ntBASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 AC109462.3-201ENST00000573934 613 ntBASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SNIP1Q8TAD8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 AC009336.1-201ENST00000608941 1553 ntBASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 MIR661-201ENST00000384842 89 ntBASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 MIR943-201ENST00000401286 94 ntBASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 AL513480.1-201ENST00000451731 511 ntBASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 KLF2P3-201ENST00000451977 1087 ntBASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 AP001059.3-201ENST00000619053 235 ntBASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNIP1Q8TAD8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TUBB3P1-201ENST00000405796 1332 ntBASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 SPDYE11-202ENST00000450699 704 ntBASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 RN7SL589P-201ENST00000481268 310 ntBASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 SPDYE9P-201ENST00000570642 692 ntBASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 SPDYE10P-202ENST00000612005 668 ntBASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 SPDYE8P-202ENST00000612377 668 ntBASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms