Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZSWIM2Q8NEG5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZSWIM2Q8NEG5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZSWIM2Q8NEG5 AP002414.3-201ENST00000589352 1468 ntBASIC18.84■□□□□ 0.61
ZSWIM2Q8NEG5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZSWIM2Q8NEG5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZSWIM2Q8NEG5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZSWIM2Q8NEG5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.83■□□□□ 0.61
ZSWIM2Q8NEG5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.83■□□□□ 0.61
ZSWIM2Q8NEG5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZSWIM2Q8NEG5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZSWIM2Q8NEG5 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 AC073648.2-201ENST00000510116 352 ntBASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 OR7E14P-202ENST00000530490 1290 ntBASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 AL353135.1-201ENST00000606729 504 ntBASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.83■□□□□ 0.6
ZSWIM2Q8NEG5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AC073621.1-201ENST00000392730 636 ntBASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AL031284.1-201ENST00000419297 478 ntBASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AC004706.3-202ENST00000621574 984 ntBASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZSWIM2Q8NEG5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AC243591.1-201ENST00000452967 1364 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AL590787.1-201ENST00000568856 1315 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 ELK2BP-201ENST00000415014 1224 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 ACTG1P4-201ENST00000425123 1122 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AF186996.4-201ENST00000467186 377 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AL773604.1-201ENST00000617417 272 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 AC022211.2-201ENST00000585075 2527 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 HTR7P1-202ENST00000624664 4411 ntBASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZSWIM2Q8NEG5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms