Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AL121761.2-201ENST00000598007 1648 ntBASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AC079776.2-201ENST00000641154 1609 ntBASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 AC012313.1-201ENST00000593393 3059 ntBASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 AC106795.1-205ENST00000512851 1056 ntBASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PRORSD1P-202ENST00000563365 2154 ntBASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDRT4Q8N9R6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AC148477.5-201ENST00000625164 1645 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 RBM17P3-201ENST00000417687 1192 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 TSPY19P-201ENST00000418461 509 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 TSPY18P-201ENST00000441642 509 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 KRT18P31-201ENST00000506277 1292 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AP001269.4-201ENST00000609611 512 ntBASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.09■□□□□ 0.17
CDRT4Q8N9R6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDRT4Q8N9R6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CDRT4Q8N9R6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDRT4Q8N9R6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDRT4Q8N9R6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDRT4Q8N9R6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDRT4Q8N9R6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms