Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 AC093458.2-201ENST00000623150 629 ntBASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TTC9CQ8N5M4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AC009336.1-201ENST00000608941 1553 ntBASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AC099336.1-202ENST00000602961 463 ntBASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
TTC9CQ8N5M4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 UPK3BP1-201ENST00000428678 509 ntBASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 MIR5100-201ENST00000579544 119 ntBASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 AC073592.5-201ENST00000624854 528 ntBASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.71□□□□□ -0.21
TTC9CQ8N5M4 AC132938.5-201ENST00000624980 1813 ntBASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 AP001094.4-201ENST00000579008 2176 ntBASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TTC9CQ8N5M4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms